Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACL43806.1 | ACL43807.1 | Cyan7425_1433 | Cyan7425_1434 | PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: npu:Npun_R4278 peptidase M61 domain-containing protein. | KEGG: gvi:gll1166 hypothetical protein. | 0.418 |
ACL43807.1 | ACL43806.1 | Cyan7425_1434 | Cyan7425_1433 | KEGG: gvi:gll1166 hypothetical protein. | PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: npu:Npun_R4278 peptidase M61 domain-containing protein. | 0.418 |
ACL43807.1 | ACL46927.1 | Cyan7425_1434 | Cyan7425_4619 | KEGG: gvi:gll1166 hypothetical protein. | PFAM: ferrochelatase; KEGG: ter:Tery_0602 ferrochelatase; Belongs to the ferrochelatase family. | 0.493 |
ACL43807.1 | acsA | Cyan7425_1434 | Cyan7425_3887 | KEGG: gvi:gll1166 hypothetical protein. | acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.689 |
ACL43807.1 | hemH | Cyan7425_1434 | Cyan7425_4517 | KEGG: gvi:gll1166 hypothetical protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.493 |
ACL46927.1 | ACL43807.1 | Cyan7425_4619 | Cyan7425_1434 | PFAM: ferrochelatase; KEGG: ter:Tery_0602 ferrochelatase; Belongs to the ferrochelatase family. | KEGG: gvi:gll1166 hypothetical protein. | 0.493 |
ACL46927.1 | hemH | Cyan7425_4619 | Cyan7425_4517 | PFAM: ferrochelatase; KEGG: ter:Tery_0602 ferrochelatase; Belongs to the ferrochelatase family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.900 |
acsA | ACL43807.1 | Cyan7425_3887 | Cyan7425_1434 | acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | KEGG: gvi:gll1166 hypothetical protein. | 0.689 |
hemH | ACL43807.1 | Cyan7425_4517 | Cyan7425_1434 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | KEGG: gvi:gll1166 hypothetical protein. | 0.493 |
hemH | ACL46927.1 | Cyan7425_4517 | Cyan7425_4619 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | PFAM: ferrochelatase; KEGG: ter:Tery_0602 ferrochelatase; Belongs to the ferrochelatase family. | 0.900 |