STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44470.1KEGG: xca:xccb100_3125 serine/threonine phosphoprotein phosphatase. (276 aa)    
Predicted Functional Partners:
ACL44469.1
SMART: von Willebrand factor type A; KEGG: xca:xccb100_3126 hypothetical protein.
 
    0.959
ACL44471.1
KEGG: mbn:Mboo_0635 hypothetical protein.
 
   
 0.948
ACL42951.1
PFAM: von Willebrand factor type A; KEGG: amr:AM1_2515 von Willebrand factor type A domain-containing protein.
 
    0.828
ACL42953.1
PFAM: WD-40 repeat protein; KEGG: amr:AM1_2517 WD-40 repeat-containing protein.
 
 
 
 0.783
ACL43070.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.759
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.661
ACL42802.1
SMART: serine/threonine protein kinase; KEGG: pmf:P9303_28671 hypothetical protein.
 
   
 0.536
ACL44174.1
KEGG: rru:Rru_A0771 hypothetical protein.
  
 
 0.536
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
   
  0.521
ACL43178.1
ATP-binding region ATPase domain protein; PFAM: tyrosine protein kinase; response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: npu:Npun_F0342 multi-sensor signal transduction multi-kinase.
 
 
 0.507
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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