STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL45744.1PFAM: ribulose bisphosphate carboxylase small chain; KEGG: tel:tll1504 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit. (114 aa)    
Predicted Functional Partners:
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
 
 0.999
ACL46739.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: cyb:CYB_0441 phosphoribulokinase.
 
  
 0.971
ACL46553.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: tel:tll1914 phosphoribulokinase.
 
  
 0.966
ACL43985.1
Carbonate dehydratase; PFAM: ribulose bisphosphate carboxylase small chain; transferase hexapeptide repeat containing protein; KEGG: tel:tll0944 carbon dioxide concentrating mechanism protein CcmM.
    
 
0.933
pgk
PFAM: phosphoglycerate kinase; KEGG: amr:AM1_0637 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.920
ACL46445.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: amr:AM1_5703 HAD family hydrolase.
     
 0.902
ACL42851.1
Glycerate kinase; KEGG: amr:AM1_2113 hypothetical protein.
     
  0.900
ACL45745.1
PFAM: chaperonin family protein RbcX; KEGG: tel:tll1505 hypothetical protein.
     
 0.729
ACL45937.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tel:tlr0803 CbbY family protein.
 
     0.723
ACL46332.1
KEGG: amr:AM1_1780 hypothetical protein.
  
 
   0.658
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.