STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46361.1Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; KEGG: pca:Pcar_0518 hypothetical protein. (391 aa)    
Predicted Functional Partners:
ACL46362.1
TIGRFAM: PAS sensor protein; SMART: PAS domain containing protein; KEGG: pca:Pcar_0517 PAS domain protein.
 
     0.948
ACL46363.1
KEGG: cth:Cthe_0425 hypothetical protein.
 
     0.920
ACL46364.1
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: mar:MAE_49340 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
     0.811
ACL46366.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mar:MAE_01090 bidirectional hydrogenase diaphorase subunit.
 
     0.797
ACL46365.1
NADH dehydrogenase (ubiquinone); PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: syn:sll1223 diaphorase subunit of the bidirectional hydrogenase.
 
     0.753
ACL44566.1
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ana:all2875 two-component hybrid sensor and regulator.
 
  
 0.739
ACL42601.1
KEGG: ava:Ava_4529 hypothetical protein.
 
     0.731
ACL46367.1
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cyt:cce_2319 NADH dehydrogenase I chain E.
 
     0.713
ACL46360.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: mar:MAE_57940 hydrogenase subunit of the bidirectional hydrogenase.
       0.682
ACL45024.1
PFAM: Heme NO binding domain protein; KEGG: ana:alr2278 similar to soluble guanylyl cyclase beta subunit.
   
    0.643
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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