STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL47233.1PFAM: EAL domain protein; KEGG: ajs:Ajs_3442 diguanylate phosphodiesterase. (256 aa)    
Predicted Functional Partners:
ACL43193.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rru:Rru_A0102 diguanylate cyclase.
 
    0.962
ACL42674.1
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: azo:azo2612 GAF/GGDEF-domain containing protein.
  
 0.954
ACL45506.1
KEGG: npu:Npun_F3972 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.951
ACL47113.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ana:alr3504 unknown protein.
 
    0.908
ACL45538.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: amr:AM1_0069 diguanylate cyclase.
 
 
   0.879
ACL43122.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cyt:cce_2611 hypothetical protein.
 
 
   0.728
ACL44566.1
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ana:all2875 two-component hybrid sensor and regulator.
 
 
 0.631
ACL43086.1
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: swo:Swol_1793 serine phosphatase RsbU regulator of sigma subunit-like protein.
 
    0.622
ACL45023.1
Multi-sensor hybrid histidine kinase; KEGG: ana:alr2279 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.584
ACL47332.1
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; CHASE4 domain protein; KEGG: amr:AM1_3454 signal transduction protein.
 
 
0.573
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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