node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACL43397.1 | ACL44447.1 | Cyan7425_1011 | Cyan7425_2084 | KEGG: amr:AM1_4478 hypothetical protein. | KEGG: tel:tlr0066 hypothetical protein. | 0.820 |
ACL43397.1 | recA | Cyan7425_1011 | Cyan7425_1671 | KEGG: amr:AM1_4478 hypothetical protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.714 |
ACL43397.1 | uvrB | Cyan7425_1011 | Cyan7425_5213 | KEGG: amr:AM1_4478 hypothetical protein. | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.651 |
ACL43397.1 | uvrC | Cyan7425_1011 | Cyan7425_0381 | KEGG: amr:AM1_4478 hypothetical protein. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.420 |
ACL43883.1 | ACL44661.1 | Cyan7425_1513 | Cyan7425_2302 | TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: amr:AM1_1428 ATP-dependent DNA helicase PcrA. | PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: nth:Nther_2137 DNA polymerase III, epsilon subunit. | 0.454 |
ACL43883.1 | pheT | Cyan7425_1513 | Cyan7425_0396 | TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: amr:AM1_1428 ATP-dependent DNA helicase PcrA. | phenylalanyl-tRNA synthetase, beta subunit; KEGG: ana:alr4958 phenylalanyl-tRNA synthetase; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.451 |
ACL43883.1 | recA | Cyan7425_1513 | Cyan7425_1671 | TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: amr:AM1_1428 ATP-dependent DNA helicase PcrA. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.779 |
ACL43883.1 | uvrA | Cyan7425_1513 | Cyan7425_1015 | TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: amr:AM1_1428 ATP-dependent DNA helicase PcrA. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.621 |
ACL43883.1 | uvrB | Cyan7425_1513 | Cyan7425_5213 | TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: amr:AM1_1428 ATP-dependent DNA helicase PcrA. | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.816 |
ACL43883.1 | uvrC | Cyan7425_1513 | Cyan7425_0381 | TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: amr:AM1_1428 ATP-dependent DNA helicase PcrA. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.806 |
ACL44447.1 | ACL43397.1 | Cyan7425_2084 | Cyan7425_1011 | KEGG: tel:tlr0066 hypothetical protein. | KEGG: amr:AM1_4478 hypothetical protein. | 0.820 |
ACL44447.1 | pheT | Cyan7425_2084 | Cyan7425_0396 | KEGG: tel:tlr0066 hypothetical protein. | phenylalanyl-tRNA synthetase, beta subunit; KEGG: ana:alr4958 phenylalanyl-tRNA synthetase; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.514 |
ACL44447.1 | recA | Cyan7425_2084 | Cyan7425_1671 | KEGG: tel:tlr0066 hypothetical protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.451 |
ACL44447.1 | uvrB | Cyan7425_2084 | Cyan7425_5213 | KEGG: tel:tlr0066 hypothetical protein. | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.976 |
ACL44661.1 | ACL43883.1 | Cyan7425_2302 | Cyan7425_1513 | PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: nth:Nther_2137 DNA polymerase III, epsilon subunit. | TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: amr:AM1_1428 ATP-dependent DNA helicase PcrA. | 0.454 |
ACL44661.1 | ACL46425.1 | Cyan7425_2302 | Cyan7425_4111 | PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: nth:Nther_2137 DNA polymerase III, epsilon subunit. | PFAM: UvrD/REP helicase; KEGG: sru:SRU_0718 ATP-dependent DNA helicase. | 0.464 |
ACL44661.1 | ACL47420.1 | Cyan7425_2302 | Cyan7425_5127 | PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: nth:Nther_2137 DNA polymerase III, epsilon subunit. | Superfamily I DNA and RNA helicase-like protein; KEGG: ter:Tery_2383 TPR repeat-containing protein. | 0.461 |
ACL44661.1 | pheT | Cyan7425_2302 | Cyan7425_0396 | PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: nth:Nther_2137 DNA polymerase III, epsilon subunit. | phenylalanyl-tRNA synthetase, beta subunit; KEGG: ana:alr4958 phenylalanyl-tRNA synthetase; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.538 |
ACL44661.1 | recA | Cyan7425_2302 | Cyan7425_1671 | PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: nth:Nther_2137 DNA polymerase III, epsilon subunit. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.885 |
ACL44661.1 | uvrA | Cyan7425_2302 | Cyan7425_1015 | PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: nth:Nther_2137 DNA polymerase III, epsilon subunit. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.607 |