STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_1531Cyclic peptide transporter; KEGG: bpt:Bpet4207 ABC transporter ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase. (554 aa)    
Predicted Functional Partners:
Bind_0847
PFAM: Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mes:Meso_2581 condensation domain.
 
  
 0.851
Bind_0845
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pst:PSPTO_2149 pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component.
 
  
 0.774
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.725
Bind_1894
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: ppr:PBPRB0014 hypothetical acyltransferase family protein.
 
  
 0.616
Bind_1113
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase.
  
  
 0.567
Bind_1532
KEGG: azc:AZC_2264 metal-dependent hydrolase.
       0.509
Bind_1533
TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mlo:mll0418 hypothetical protein.
       0.509
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
       0.509
Bind_0139
PFAM: AMP-dependent synthetase and ligase; KEGG: ppg:PputGB1_4083 amino acid adenylation domain protein.
 
  
 0.480
Bind_2327
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gvi:glr0349 ferrichrome-iron receptor.
 
  
 0.436
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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