node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplK | Bind_1344 | Bind_1343 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplM | Bind_1344 | Bind_1378 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplA | rplS | Bind_1344 | Bind_2107 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.998 |
rplA | rplT | Bind_1344 | Bind_3043 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplA | rplU | Bind_1344 | Bind_0418 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplA | rpmA | Bind_1344 | Bind_0417 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L27; KEGG: azc:AZC_4093 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
rplA | rpmF | Bind_1344 | Bind_0425 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: smd:Smed_3119 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.997 |
rplA | rpmI | Bind_1344 | Bind_3042 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L35; KEGG: bbt:BBta_0216 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.996 |
rplA | rpsB | Bind_1344 | Bind_2223 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S2; KEGG: mex:Mext_2073 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
rplA | rpsD | Bind_1344 | Bind_1256 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | RNA-binding S4 domain protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
rplK | rplA | Bind_1343 | Bind_1344 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.999 |
rplK | rplM | Bind_1343 | Bind_1378 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplK | rplS | Bind_1343 | Bind_2107 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
rplK | rplT | Bind_1343 | Bind_3043 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplK | rplU | Bind_1343 | Bind_0418 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplK | rpmA | Bind_1343 | Bind_0417 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | PFAM: ribosomal protein L27; KEGG: azc:AZC_4093 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
rplK | rpmF | Bind_1343 | Bind_0425 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: smd:Smed_3119 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.996 |
rplK | rpmI | Bind_1343 | Bind_3042 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | PFAM: ribosomal protein L35; KEGG: bbt:BBta_0216 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.997 |
rplK | rpsB | Bind_1343 | Bind_2223 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | PFAM: ribosomal protein S2; KEGG: mex:Mext_2073 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
rplK | rpsD | Bind_1343 | Bind_1256 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | RNA-binding S4 domain protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |