STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3204PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_1387 glyoxalase/bleomycin resistance protein/dioxygenase. (131 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
 
  
 0.938
Bind_0854
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hha:Hhal_0152 glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 
0.922
Bind_2506
PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B3049 chaperone protein HchA.
  
 
 0.910
Bind_3203
KEGG: oan:Oant_0061 hypothetical protein.
 
     0.839
Bind_3226
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3999 threonine dehydratase.
   
 0.823
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.821
Bind_1664
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nha:Nham_0613 amine oxidase.
     
  0.800
Bind_1769
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase.
     
  0.800
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
  0.800
Bind_3575
PFAM: amine oxidase; KEGG: mca:MCA2837 amine oxidase family, flavin-containing protein.
     
  0.800
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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