STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3422PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3230 GCN5-related N-acetyltransferase. (166 aa)    
Predicted Functional Partners:
Bind_1629
PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_1615 GCN5-related N-acetyltransferase.
  
     0.698
Bind_3423
PFAM: Mg2 transporter protein CorA family protein; KEGG: mex:Mext_4784 Mg2 transporter protein CorA family protein.
       0.495
Bind_0747
PFAM: protein of unknown function DUF1159; KEGG: azc:AZC_0457 hypothetical protein.
  
     0.487
Bind_1656
PFAM: protein of unknown function DUF1491; KEGG: rpe:RPE_1874 protein of unknown function DUF1491.
  
     0.486
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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