STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_0952KEGG: dar:Daro_3360 protein phosphatase 2C-like. (276 aa)    
Predicted Functional Partners:
Tgr7_2454
KEGG: nmu:Nmul_A0515 dihydrolipoamide dehydrogenase.
  
 0.956
Tgr7_0951
KEGG: azo:azo3330 FHA-domain containing protein.
 
 
 0.951
Tgr7_0699
KEGG: rfr:Rfer_3942 serine/threonine protein kinase with CHASE2 sensor.
 
 0.905
Tgr7_0458
PFAM: HEAT domain containing protein; tyrosine protein kinase; PBS lyase HEAT domain protein repeat-containing protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: rxy:Rxyl_0021 serine/threonine protein kinase.
 
 0.902
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.877
Tgr7_2548
KEGG: azo:azo3330 FHA-domain containing protein.
 
 
 0.770
Tgr7_0953
KEGG: aeh:Mlg_1995 lytic transglycosylase, catalytic.
       0.724
Tgr7_0197
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.712
Tgr7_0506
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: ter:Tery_3412 adenylate/guanylate cyclase.
 
 
 0.662
Tgr7_0934
Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.625
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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