STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgr7_2855KEGG: bpt:Bpet1490 hypothetical protein. (222 aa)    
Predicted Functional Partners:
Tgr7_2856
KEGG: mpt:Mpe_A2391 hypothetical protein.
 
     0.949
Tgr7_2857
KEGG: bpt:Bpet1360 hypothetical protein.
 
     0.948
Tgr7_2858
KEGG: ajs:Ajs_2187 hypothetical protein.
 
     0.948
Tgr7_2859
SMART: AAA ATPase; KEGG: ajs:Ajs_2186 hypothetical protein.
 
     0.944
Tgr7_2860
KEGG: ajs:Ajs_2185 hypothetical protein.
 
     0.939
Tgr7_2862
PFAM: protein of unknown function DUF1525; KEGG: ajs:Ajs_2183 hypothetical protein.
 
     0.847
Tgr7_2863
PFAM: protein of unknown function DUF1527; KEGG: eba:ebA2511 hypothetical protein.
 
     0.847
Tgr7_2864
KEGG: bpt:Bpet1376 hypothetical protein.
 
     0.846
Tgr7_2866
KEGG: eba:ebA2395 hypothetical protein.
 
     0.844
Tgr7_2840
KEGG: bpt:Bpet1344 putative lipoprotein.
 
     0.800
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.