STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiENitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Catalyzes the hydrolysis of short-chain aliphatic amides to their corresponding organic acids with release of ammonia. (347 aa)    
Predicted Functional Partners:
Tgr7_2243
Acylphosphatase; KEGG: xcv:XCV0970 acylphosphatase.
     
  0.900
Tgr7_3114
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: sde:Sde_2973 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.734
Tgr7_3109
KEGG: mfa:Mfla_1776 glutamine amidotransferase, class-II.
 
     0.710
Tgr7_3116
KEGG: sde:Sde_2971 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.698
Tgr7_3112
TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: sde:Sde_2975 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.
 
  
 0.697
Tgr7_3110
Formamidase; KEGG: mfa:Mfla_1777 formamidase.
 
   
 0.689
Tgr7_3115
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: rpe:RPE_4599 ABC transporter related.
 
     0.656
Tgr7_3113
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: sde:Sde_2974 putative branched-chain amino acid transport system permease protein.
 
   
 0.626
Tgr7_3118
SMART: von Willebrand factor type A; KEGG: hha:Hhal_1043 von Willebrand factor, type A.
 
     0.619
Tgr7_0425
PFAM: protein of unknown function DUF1018; KEGG: eca:ECA3696 putative phage regluatory protein.
   
    0.420
Your Current Organism:
Thioalkalivibrio sulfidiphilus
NCBI taxonomy Id: 396588
Other names: T. sulfidiphilus HL-EbGr7, Thioalkalivibrio sp. HL-EbGR7, Thioalkalivibrio sulfidiphilus HL-EbGr7, Thioalkalivibrio sulfidiphilus str. HL-EbGr7, Thioalkalivibrio sulfidiphilus strain HL-EbGr7, Thioalkalivibrio sulfidophilus HL-EbGr7
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