Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Aave_0683 | Aave_0684 | KEGG: rso:RSc2609 probable lipoprotein. | KEGG: rso:RSc2608 hypothetical/unknown protein. | 0.865 |
Aave_0683 | Aave_0685 | KEGG: rso:RSc2609 probable lipoprotein. | KEGG: rso:RSc2607 hypothetical protein. | 0.832 |
Aave_0683 | Aave_0686 | KEGG: rso:RSc2609 probable lipoprotein. | KEGG: rso:RSc2606 hypothetical replication initiator and transcription repressor protein. | 0.784 |
Aave_0683 | Aave_0687 | KEGG: rso:RSc2609 probable lipoprotein. | Plasmid segregation oscillating ATPase ParF; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rme:Rmet_1486 cobyrinic acid a,c-diamide synthase. | 0.771 |
Aave_0683 | Aave_0688 | KEGG: rso:RSc2609 probable lipoprotein. | Plasmid segregation centromere-binding protein ParG; KEGG: rso:RSc2604 hypothetical/unknown protein. | 0.812 |
Aave_0683 | Aave_0689 | KEGG: rso:RSc2609 probable lipoprotein. | KEGG: rso:RSc2603 hypothetical/unknown protein. | 0.799 |
Aave_0683 | Aave_0690 | KEGG: rso:RSc2609 probable lipoprotein. | Conjugation peptidase TraF; KEGG: rso:RSc2602 probable conjugal transfer TRAF transmembrane protein; Serine peptidase; MEROPS family S26C. | 0.808 |
Aave_0683 | Aave_0691 | KEGG: rso:RSc2609 probable lipoprotein. | KEGG: rso:RSc2601 hypothetical/unknown protein. | 0.768 |
Aave_0683 | Aave_0725 | KEGG: rso:RSc2609 probable lipoprotein. | PFAM: CopG domain protein DNA-binding domain protein; KEGG: rme:Rmet_1549 CopG-like DNA-binding. | 0.739 |
Aave_0683 | Aave_0736 | KEGG: rso:RSc2609 probable lipoprotein. | KEGG: rso:RSc2574 hypothetical/unknown protein. | 0.768 |
Aave_0684 | Aave_0683 | KEGG: rso:RSc2608 hypothetical/unknown protein. | KEGG: rso:RSc2609 probable lipoprotein. | 0.865 |
Aave_0684 | Aave_0685 | KEGG: rso:RSc2608 hypothetical/unknown protein. | KEGG: rso:RSc2607 hypothetical protein. | 0.892 |
Aave_0684 | Aave_0686 | KEGG: rso:RSc2608 hypothetical/unknown protein. | KEGG: rso:RSc2606 hypothetical replication initiator and transcription repressor protein. | 0.850 |
Aave_0684 | Aave_0687 | KEGG: rso:RSc2608 hypothetical/unknown protein. | Plasmid segregation oscillating ATPase ParF; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rme:Rmet_1486 cobyrinic acid a,c-diamide synthase. | 0.796 |
Aave_0684 | Aave_0688 | KEGG: rso:RSc2608 hypothetical/unknown protein. | Plasmid segregation centromere-binding protein ParG; KEGG: rso:RSc2604 hypothetical/unknown protein. | 0.844 |
Aave_0684 | Aave_0689 | KEGG: rso:RSc2608 hypothetical/unknown protein. | KEGG: rso:RSc2603 hypothetical/unknown protein. | 0.841 |
Aave_0684 | Aave_0690 | KEGG: rso:RSc2608 hypothetical/unknown protein. | Conjugation peptidase TraF; KEGG: rso:RSc2602 probable conjugal transfer TRAF transmembrane protein; Serine peptidase; MEROPS family S26C. | 0.842 |
Aave_0684 | Aave_0691 | KEGG: rso:RSc2608 hypothetical/unknown protein. | KEGG: rso:RSc2601 hypothetical/unknown protein. | 0.795 |
Aave_0684 | Aave_0725 | KEGG: rso:RSc2608 hypothetical/unknown protein. | PFAM: CopG domain protein DNA-binding domain protein; KEGG: rme:Rmet_1549 CopG-like DNA-binding. | 0.765 |
Aave_0684 | Aave_0736 | KEGG: rso:RSc2608 hypothetical/unknown protein. | KEGG: rso:RSc2574 hypothetical/unknown protein. | 0.772 |
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