STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_1468PFAM: Forkhead-associated protein; KEGG: pfl:PFL_6085 FHA domain protein, putative. (777 aa)    
Predicted Functional Partners:
Aave_1472
PFAM: OmpA/MotB domain protein; KEGG: bbr:BB0815 hypothetical protein.
 
  
 0.949
Aave_1471
PFAM: protein of unknown function DUF876; KEGG: bur:Bcep18194_B1594 protein of unknown function DUF876.
 
  
 0.916
Aave_1473
PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bbr:BB0816 hypothetical protein.
 
  
 0.913
Aave_1474
KEGG: bbr:BB0817 hypothetical protein.
 
  
 0.911
Aave_1470
KEGG: bte:BTH_II0251 lipoprotein, putative.
 
  
 0.910
Aave_1475
PFAM: ImpA domain protein; KEGG: bps:BPSS2101 hypothetical protein.
 
  
 0.903
Aave_1476
PFAM: uncharacterized conserved protein UCP028301; KEGG: bte:BTH_II0121 protein of unknown function (DUF770) superfamily.
 
  
 0.879
Aave_1477
PFAM: protein of unknown function DUF877; KEGG: bbr:BB0801 hypothetical protein.
 
  
 0.878
Aave_1469
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: dar:Daro_3311 protein phosphatase 2C-like.
 
  
 0.877
Aave_1479
PFAM: protein of unknown function DUF1316; KEGG: bbr:BB0804 hypothetical protein.
 
  
 0.869
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.