STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_1469PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: dar:Daro_3311 protein phosphatase 2C-like. (249 aa)    
Predicted Functional Partners:
Aave_2464
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_2214 dihydrolipoamide dehydrogenase.
  
 0.913
Aave_1466
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bur:Bcep18194_B1590 serine/threonine protein kinase.
 
 
 0.912
Aave_1468
PFAM: Forkhead-associated protein; KEGG: pfl:PFL_6085 FHA domain protein, putative.
 
  
 0.877
Aave_4054
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_II0256 serine/threonine protein kinase.
 
 
 0.853
Aave_3581
PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: pol:Bpro_1337 serine/threonine protein kinase.
 
 
 0.849
Aave_3066
PFAM: protein kinase; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_I0514 protein kinase domain protein.
 
 
 0.846
Aave_4274
PFAM: protein kinase; UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3699 serine/threonine protein kinase.
 
 
 0.814
Aave_1472
PFAM: OmpA/MotB domain protein; KEGG: bbr:BB0815 hypothetical protein.
 
  
 0.755
Aave_1474
KEGG: bbr:BB0817 hypothetical protein.
 
  
 0.743
Aave_1470
KEGG: bte:BTH_II0251 lipoprotein, putative.
 
  
 0.712
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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