STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2587PFAM: dihydrodipicolinate synthetase; KEGG: rme:Rmet_4736 dihydrodipicolinate synthetase; Belongs to the DapA family. (303 aa)    
Predicted Functional Partners:
Aave_3623
D-glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: reu:Reut_B3715 glucarate dehydratase.
 
  
 0.964
Aave_2247
2-dehydro-3-deoxy-L-arabinonate dehydratase; PFAM: dihydrodipicolinate synthetase; KEGG: bte:BTH_II1630 dihydrodipicolinate synthase, putative; Belongs to the DapA family.
  
  
  0.957
Aave_2595
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: pol:Bpro_3104 galactarate dehydratase.
 
  
 0.948
Aave_2590
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: pfo:Pfl_3452 NAD-dependent epimerase/dehydratase.
 
   
 0.708
Aave_2589
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: psp:PSPPH_4253 transcriptional regulator, GntR family.
 
   
 0.698
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
  
 0.667
Aave_2588
PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3101 uncharacterized protein UPF0065.
 
     0.653
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
     0.652
Aave_0115
PFAM: aldehyde dehydrogenase; KEGG: pol:Bpro_2298 aldehyde dehydrogenase.
 
  
 0.586
Aave_3282
TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pol:Bpro_1792 chorismate mutase.
  
  
 0.573
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
Server load: high (88%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.