STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2765KEGG: noc:Noc_0631 hypothetical protein. (217 aa)    
Predicted Functional Partners:
Aave_2763
KEGG: eba:ebA405 hypothetical protein.
       0.782
Aave_2764
KEGG: eba:ebA403 hypothetical protein.
       0.782
Aave_2766
KEGG: eba:ebA398 hypothetical protein.
       0.782
Aave_2767
KEGG: lma:LmjF35.0290 hypothetical protein, conserved.
       0.777
Aave_2762
KEGG: noc:Noc_0640 hypothetical protein.
       0.756
Aave_1948
PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; KEGG: rfr:Rfer_1711 histidine kinase internal protein.
  
 
 0.468
Aave_2036
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; KEGG: reu:Reut_A1966 ATP-binding region, ATPase-like:histidine kinase internal region.
  
 
 0.468
Aave_2759
KEGG: eba:ebA409 hypothetical protein.
       0.418
Aave_2760
KEGG: noc:Noc_0643 hypothetical protein.
       0.418
Aave_2768
Hypothetical protein; KEGG: stt:t4239 putative type IV pilus protein.
       0.417
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.