STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutITIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pol:Bpro_1035 imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (416 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.999
Aave_2960
TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; KEGG: pol:Bpro_1034 formiminoglutamate deiminase.
 
 
 0.996
hutH
KEGG: pol:Bpro_1043 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.995
Aave_2959
PFAM: N-formylglutamate amidohydrolase; KEGG: rme:Rmet_2850 N-formylglutamate amidohydrolase.
 
  
 0.960
Aave_2966
Transcriptional regulator, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: pol:Bpro_1044 transcriptional regulator, GntR family.
 
  
 0.910
Aave_2962
PFAM: protein of unknown function DUF886; KEGG: pol:Bpro_1036 protein of unknown function DUF886.
 
   
 0.825
Aave_4633
PFAM: N-formylglutamate amidohydrolase; KEGG: pol:Bpro_2708 N-formylglutamate amidohydrolase.
  
  
 0.705
Aave_2958
PFAM: protein of unknown function DUF6, transmembrane; KEGG: reu:Reut_B4855 protein of unknown function DUF6, transmembrane.
       0.701
Aave_2963
PFAM: Phytanoyl-CoA dioxygenase; KEGG: pol:Bpro_1037 phytanoyl-CoA dioxygenase.
       0.673
Aave_0120
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rfr:Rfer_3884 arginase; Belongs to the arginase family.
  
  
 0.503
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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