STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM96803.1Transglycosylase SLT domain-containing protein. (322 aa)    
Predicted Functional Partners:
SFM83832.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.939
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.921
SFM47272.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
  
 
 0.892
SFM47292.1
Flagellar basal-body rod protein FlgG.
  
 
 0.892
SFM78915.1
Flagellar basal-body rod protein FlgG.
  
 
 0.892
SFN01894.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.841
fliE
Flagellar hook-basal body complex protein FliE.
 
  
 0.749
SFM69330.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
 
 
 0.748
SFM81183.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
   
 
 0.746
SFN08490.1
Protein of unknown function.
 
  
 0.746
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.