Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADC48221.1 | ADC50762.1 | BpOF4_00760 | BpOF4_13555 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.748 |
ADC48221.1 | ADC51240.1 | BpOF4_00760 | BpOF4_15955 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG1960 Acyl-CoA dehydrogenases. | 0.597 |
ADC48221.1 | ADC51266.1 | BpOF4_00760 | BpOF4_16085 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.600 |
ADC48221.1 | ADC51574.1 | BpOF4_00760 | BpOF4_17665 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.600 |
ADC48221.1 | ADC51744.1 | BpOF4_00760 | BpOF4_18515 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.600 |
ADC48221.1 | atoB | BpOF4_00760 | BpOF4_07060 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.600 |
ADC48221.1 | atoB-2 | BpOF4_00760 | BpOF4_13415 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.600 |
ADC48221.1 | fadA | BpOF4_00760 | BpOF4_05115 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | acetyl-CoA acetyltransferase, thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.600 |
ADC48221.1 | hbd | BpOF4_00760 | BpOF4_07055 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.744 |
ADC48221.1 | rpmF | BpOF4_00760 | BpOF4_00765 | COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.771 |
ADC50762.1 | ADC48221.1 | BpOF4_13555 | BpOF4_00760 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.748 |
ADC50762.1 | ADC51240.1 | BpOF4_13555 | BpOF4_15955 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG1960 Acyl-CoA dehydrogenases. | 0.491 |
ADC50762.1 | ADC51266.1 | BpOF4_13555 | BpOF4_16085 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.976 |
ADC50762.1 | ADC51574.1 | BpOF4_13555 | BpOF4_17665 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.976 |
ADC50762.1 | ADC51744.1 | BpOF4_13555 | BpOF4_18515 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.771 |
ADC50762.1 | atoB | BpOF4_13555 | BpOF4_07060 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.976 |
ADC50762.1 | atoB-2 | BpOF4_13555 | BpOF4_13415 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.976 |
ADC50762.1 | fadA | BpOF4_13555 | BpOF4_05115 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | acetyl-CoA acetyltransferase, thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.803 |
ADC50762.1 | hbd | BpOF4_13555 | BpOF4_07055 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.910 |
ADC51240.1 | ADC48221.1 | BpOF4_15955 | BpOF4_00760 | COG1960 Acyl-CoA dehydrogenases. | COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.597 |
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