node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADC48125.1 | ADC51956.1 | BpOF4_00280 | BpOF4_19585 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.673 |
ADC48125.1 | cshA | BpOF4_00280 | BpOF4_07415 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | 0.638 |
ADC48125.1 | dbpA | BpOF4_00280 | BpOF4_18460 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.627 |
ADC48125.1 | pnp | BpOF4_00280 | BpOF4_19700 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.636 |
ADC48125.1 | rplC | BpOF4_00280 | BpOF4_08550 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.801 |
ADC48125.1 | rplD | BpOF4_00280 | BpOF4_08555 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.718 |
ADC48125.1 | rplM | BpOF4_00280 | BpOF4_08720 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.743 |
ADC48125.1 | ybxF | BpOF4_00280 | BpOF4_08520 | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | COG1358 Ribosomal protein HS6-type (S12/L30/L7a); Belongs to the eukaryotic ribosomal protein eL8 family. | 0.598 |
ADC51956.1 | ADC48125.1 | BpOF4_19585 | BpOF4_00280 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.673 |
ADC51956.1 | cshA | BpOF4_19585 | BpOF4_07415 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | 0.905 |
ADC51956.1 | dbpA | BpOF4_19585 | BpOF4_18460 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.911 |
ADC51956.1 | fusA | BpOF4_19585 | BpOF4_08535 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.738 |
ADC51956.1 | pnp | BpOF4_19585 | BpOF4_19700 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.813 |
ADC51956.1 | rplC | BpOF4_19585 | BpOF4_08550 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.706 |
ADC51956.1 | rplD | BpOF4_19585 | BpOF4_08555 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.682 |
ADC51956.1 | rplM | BpOF4_19585 | BpOF4_08720 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.652 |
ADC51956.1 | ybxF | BpOF4_19585 | BpOF4_08520 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | COG1358 Ribosomal protein HS6-type (S12/L30/L7a); Belongs to the eukaryotic ribosomal protein eL8 family. | 0.677 |
ADC51956.1 | yqeH | BpOF4_19585 | BpOF4_13230 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | GTP-binding protein YqeH putative GTPase; COG1161 Predicted GTPases. | 0.627 |
cshA | ADC48125.1 | BpOF4_07415 | BpOF4_00280 | ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.638 |
cshA | ADC51956.1 | BpOF4_07415 | BpOF4_19585 | ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.905 |