STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD18715.1PFAM: O-methyltransferase family 3; Methyltransferase type 11; KEGG: bur:Bcep18194_C6637 O-methyltransferase, family 3. (238 aa)    
Predicted Functional Partners:
ACD18714.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bur:Bcep18194_C6638 4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.609
ACD18713.1
KEGG: bur:Bcep18194_C6639 hypothetical protein.
       0.542
ACD18712.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A1388 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily.
       0.527
ACD18716.1
KEGG: bxe:Bxe_B0669 hypothetical protein.
       0.462
ACD21000.1
Methyltransferase type 11; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: azo:azo3595 hypothetical protein.
 
  
 0.427
ACD19489.1
PFAM: protein of unknown function DUF692; KEGG: bpl:BURPS1106A_2030 hypothetical protein; Belongs to the UPF0276 family.
  
    0.412
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.