STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD19075.1PFAM: glycosyl transferase group 1; KEGG: sat:SYN_02667 alpha-D-QuiNAc alpha-1,3-galactosyltransferase. (396 aa)    
Predicted Functional Partners:
ACD19073.1
PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet4027 putative glycosyltransferase.
 
  
 0.824
ACD19070.1
TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bpe:BP3150 polysaccharide biosynthesis protein.
 
  
 0.777
ACD19071.1
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: prw:PsycPRwf_0248 NAD-dependent epimerase/dehydratase.
 
  
 0.774
ACD19077.1
KEGG: aby:ABAYE2503 hypothetical protein; putative exported protein.
 
     0.710
ACD19074.1
PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet4025 putative glycosyltransferase.
 
  
0.697
ACD19076.1
PFAM: polysaccharide deacetylase; KEGG: swi:Swit_2654 hypothetical protein.
  
    0.653
ACD19072.1
PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: bam:Bamb_6493 virulence factor MviN family protein.
 
   
 0.610
ACD19069.1
KEGG: bte:BTH_I1354 exopolysaccharide tyrosine-protein kinase, putative; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.553
ACD15240.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_A3866 undecaprenyl-phosphate galactosephosphotransferase.
  
 0.536
ACD16363.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_A2246 undecaprenyl-phosphate galactosephosphotransferase.
  
 0.530
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.