STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD19277.1TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bte:BTH_I2964 EvpA. (182 aa)    
Predicted Functional Partners:
ACD19278.1
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bmu:Bmul_2929 type VI secretion protein, EvpB/VC_A0108 family.
 
 0.999
ACD15359.1
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bxe:Bxe_A2094 putative cytoplasmic protein.
 
 0.995
ACD19279.1
TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bte:BTH_I2962 unnamed protein product; similar to Hcp protein.
 
 
 0.981
ACD15363.1
PFAM: virulence protein SciE type; KEGG: bam:Bamb_3471 virulence protein, SciE type.
 
   0.975
ACD15357.1
PFAM: protein of unknown function DUF796; KEGG: bxe:Bxe_A2091 putative cytoplasmic protein.
 
 
 0.961
ACD19734.1
PFAM: protein of unknown function DUF796; KEGG: bxe:Bxe_B1237 hypothetical protein.
 
 
 0.960
ACD15367.1
PFAM: ImpA domain protein; KEGG: bxe:Bxe_A2098 conserved hypothetical cytoplasmic protein.
 
  
 0.948
ACD15354.1
TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A2088 hypothetical protein.
 
  
 0.942
ACD19274.1
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bpd:BURPS668_3639 hypothetical protein.
 
  
 0.939
ACD19280.1
TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bcm:Bcenmc03_0448 type VI secretion system lysozyme-related protein.
 
  
 0.932
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.