STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD19549.1Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1405 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. (352 aa)    
Predicted Functional Partners:
ACD19550.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1404 ABC sugar transporter, ATPase subunit.
 
 0.957
ACD19551.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B1403 ABC sugar transporter, periplasmic ligand binding protein.
 
 
 0.920
ACD18566.1
KEGG: vei:Veis_0885 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.839
ACD14806.1
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A4340 ABC sugar transporter, periplasmic ligand binding protein.
 
 0.838
ACD17627.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcn:Bcen_3547 periplasmic binding protein/LacI transcriptional regulator.
 
 0.822
rbsA-4
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.821
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.820
ACD19831.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_1226 periplasmic binding protein/LacI transcriptional regulator.
 
 0.816
ACD14805.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A4341 ABC sugar transporter, fused ATPase subunits.
 
 0.814
ACD18516.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0558 ABC sugar transporter, periplasmic ligand binding protein.
 
 
 0.814
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.