STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD19787.1PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_B1176 putative oxidoreductase. (256 aa)    
Predicted Functional Partners:
ACD19786.1
PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_B1177 putative electron transport protein.
 
 0.989
ACD19785.1
PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_B1178 hypothetical protein.
 
 
 0.978
ACD16979.1
PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_A1548 putative iron-sulfur binding protein.
 
 0.959
ACD17325.1
PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_A1053 hypothetical protein.
 
 
 0.893
ACD17068.1
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.583
ACD19784.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_C6126 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
       0.568
ACD16386.1
PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 conserved protein possibly involved in utilization of glycolate.
 
  
 0.487
ACD20711.1
PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 conserved protein possibly involved in utilization of glycolate.
 
  
 0.487
ACD19789.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: pmy:Pmen_4031 transcriptional regulator, XRE family.
   
 
 0.479
ACD19788.1
TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bpa:BPP2765 hypothetical protein.
       0.439
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.