STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD21515.1PFAM: ribulose bisphosphate carboxylase large chain; KEGG: bxe:Bxe_B0441 rubisco-like protein; Belongs to the RuBisCO large chain family. (432 aa)    
Predicted Functional Partners:
ACD21516.1
PFAM: type III effector Hrp-dependent outers; KEGG: bxe:Bxe_B0442 hypothetical protein.
 
   
 0.936
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.930
ACD21514.1
KEGG: bxe:Bxe_B0440 putative lactoylglutathione lyase.
 
   
 0.926
ACD17314.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A1064 putative haloacid dehalogenase-like hydrolase.
    
 0.912
ACD16951.1
PFAM: transferase hexapeptide repeat containing protein; KEGG: bxe:Bxe_A1577 putative transferase, hexapeptide repeat.
    
 
 0.750
ACD20742.1
PFAM: transferase hexapeptide repeat containing protein; KEGG: bur:Bcep18194_A5409 carbonic anhydrase/acetyltransferaseisoleucine patch superfamily.
    
 
 0.750
ACD21511.1
PFAM: regulatory protein LacI; KEGG: bxe:Bxe_B0437 transcriptional regulator, LacI family.
 
    0.750
ACD17666.1
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
 
  
 0.644
pgk
PFAM: phosphoglycerate kinase; KEGG: bxe:Bxe_A0689 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.633
ACD20264.1
PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B2170 putative aldolase.
 
  
 0.580
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.