STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2034KEGG: vei:Veis_4154 hypothetical protein. (116 aa)    
Predicted Functional Partners:
Daci_2455
KEGG: ajs:Ajs_2784 hypothetical protein.
  
     0.681
Daci_5251
KEGG: aav:Aave_1202 small-conductance mechanosensitive channel-like protein.
  
     0.663
Daci_1622
Hypothetical protein; KEGG: smd:Smed_1667 MT-A70 family protein.
  
     0.600
Daci_2484
KEGG: pol:Bpro_3373 putative lipoprotein.
  
     0.558
Daci_2483
PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pen:PSEEN3175 hypothetical protein.
  
     0.538
Daci_2174
PFAM: protein of unknown function UPF0153; KEGG: aav:Aave_1159 protein of unknown function UPF0153.
  
     0.519
Daci_2922
PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ajs:Ajs_0010 multi-sensor hybrid histidine kinase.
  
     0.519
Daci_3279
KEGG: rsh:Rsph17029_3599 hypothetical protein.
  
     0.494
Daci_3280
PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE1084 hypothetical protein.
  
     0.489
Daci_2221
KEGG: pap:PSPA7_1712 hypothetical protein.
  
     0.482
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.