STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2893KEGG: mxa:MXAN_0976 putative lipoprotein. (342 aa)    
Predicted Functional Partners:
Daci_2892
PFAM: Di-haem cytochrome c peroxidase; KEGG: lil:LA2974 methylamine utilization protein mauG.
 
     0.951
Daci_2891
KEGG: dar:Daro_0198 hypothetical protein.
       0.797
Daci_2890
PFAM: protein of unknown function DUF461; KEGG: rfr:Rfer_0618 protein of unknown function DUF461.
       0.783
Daci_2896
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_4448 TonB-dependent receptor.
 
     0.628
Daci_2895
PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 protein of unknown function DUF461.
       0.615
Daci_2894
Hypothetical protein.
       0.603
Daci_3372
PFAM: regulator of chromosome condensation RCC1; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein.
  
     0.559
Daci_0700
KEGG: mxa:MXAN_4169 hypothetical protein.
  
     0.475
Daci_5512
KEGG: sus:Acid_6164 Ig family protein.
  
     0.419
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.