STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3119TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: rca:Rcas_0471 conserved repeat domain. (409 aa)    
Predicted Functional Partners:
Daci_5512
KEGG: sus:Acid_6164 Ig family protein.
 
   
 0.447
Daci_2483
PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pen:PSEEN3175 hypothetical protein.
  
     0.442
Daci_0558
KEGG: dno:DNO_0148 hypothetical protein.
  
   
 0.417
Daci_0529
PFAM: Ig domain protein group 1 domain protein; KEGG: mmu:239611 mucin 19.
 
 
 0.412
Daci_2528
PFAM: lipolytic protein G-D-S-L family; KEGG: pau:PA14_23690 putative secreted protein.
  
 
 0.408
Daci_4035
Arylesterase; PFAM: lipolytic protein G-D-S-L family; KEGG: ajs:Ajs_2271 lipolytic enzyme, G-D-S-L family.
  
 
 0.408
Daci_3118
PFAM: regulatory protein AsnC/Lrp family; KEGG: bbr:BB3050 leucine-responsive regulatory protein.
  
    0.401
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.