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xseA protein (Shewanella pealeana) - STRING interaction network
"xseA" - Exodeoxyribonuclease 7 large subunit in Shewanella pealeana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
xseAExodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family (445 aa)    
Predicted Functional Partners:
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (82 aa)
 
  0.996
Spea_1963
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (194 aa)
       
  0.766
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (525 aa)
   
   
  0.756
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (490 aa)
     
      0.725
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (205 aa)
 
   
  0.656
Spea_1162
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (373 aa)
   
        0.646
Spea_0807
TIGRFAM- single-stranded-DNA-specific exonuclease RecJ; PFAM- phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG- slo-Shew_0772 single-stranded-DNA-specific exonuclease RecJ (574 aa)
 
   
  0.644
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1293 aa)
   
   
  0.608
Spea_1924
TIGRFAM- DNA polymerase III, delta prime subunit; KEGG- slo-Shew_1580 DNA polymerase III, delta prime subunit (305 aa)
   
     
  0.560
Spea_0605
PFAM- biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG- slo-Shew_3218 carbamoyl-phosphate synthase L chain, ATP-binding (1517 aa)
   
   
  0.559
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana, Shewanella pealeana ATCC 700345, Shewanella pealeana ATCC700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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