node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dshi_1660 | fixG | Dshi_1660 | Dshi_0665 | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | Nitrogen fixation protein fixG; TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; PFAM00037 4Fe-4S binding domain; high swissprot hit to Nitrogen fixation protein fixG from Sinorhizobium meliloti; high Ref ZP hit to iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. AzwK-3b]. | 0.926 |
Dshi_1660 | fixH | Dshi_1660 | Dshi_0666 | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | PFAM: FixH family protein; NCBI conserved domains: fixH; low swissprot hit to Nitrogen fixation protein fixH from Sinorhizobium meliloti, middle Ref ZP hit to FixH [Silicibacter sp. TM1040]. | 0.684 |
Dshi_1660 | fixN | Dshi_1660 | Dshi_0661 | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I PFAM: cytochrome c oxidase subunit I; NCBI conserved domains: cd01661, cbb3_Oxidase_I; high swissprot hit to Cytochrome c oxidase subunit 1 homolog, bacteroid from Sinorhizobium meliloti; high Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit I [Roseovarius sp. TM1035]; cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
Dshi_1660 | fixO | Dshi_1660 | Dshi_0662 | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II PFAM: cytochrome C oxidase mono-heme subunit/FixO; NCBI conserved domains: fixO; no significant swissprot, high Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit II [Roseovarius sp. TM1035]; cbb3-type, subunit II. | 0.925 |
Dshi_1660 | fixP | Dshi_1660 | Dshi_0664 | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | Cytochrome c oxidase; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.904 |
Dshi_1660 | fixQ | Dshi_1660 | Dshi_0663 | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | PFAM: Cbb3-type cytochrome oxidase component; NCBI conserved domains: fixQ; no significant swissprot hit; low Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit IV [Loktanella vestfoldensis SKA53]; cbb3-type, subunit IV. | 0.923 |
Dshi_1660 | hemN2 | Dshi_1660 | Dshi_0659 | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | TIGRFAM: oxygen-independent coproporphyrinogen III oxidase PFAM: Radical SAM domain protein; HemN domain protein (same as NCBI conserved domains); high swissprot hit to Oxygen-independent coproporphyrinogen III oxidase from Paracoccus denitrificans PD1222; high Ref ZP hit to coproporphyrinogen III oxidase [Roseovarius sp. TM1035]; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.999 |
ctaB | ctaC | Dshi_1141 | Dshi_1140 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
ctaB | fixN | Dshi_1141 | Dshi_0661 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I PFAM: cytochrome c oxidase subunit I; NCBI conserved domains: cd01661, cbb3_Oxidase_I; high swissprot hit to Cytochrome c oxidase subunit 1 homolog, bacteroid from Sinorhizobium meliloti; high Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit I [Roseovarius sp. TM1035]; cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.919 |
ctaB | fixO | Dshi_1141 | Dshi_0662 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II PFAM: cytochrome C oxidase mono-heme subunit/FixO; NCBI conserved domains: fixO; no significant swissprot, high Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit II [Roseovarius sp. TM1035]; cbb3-type, subunit II. | 0.913 |
ctaB | fixP | Dshi_1141 | Dshi_0664 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | Cytochrome c oxidase; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.908 |
ctaB | fixQ | Dshi_1141 | Dshi_0663 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | PFAM: Cbb3-type cytochrome oxidase component; NCBI conserved domains: fixQ; no significant swissprot hit; low Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit IV [Loktanella vestfoldensis SKA53]; cbb3-type, subunit IV. | 0.901 |
ctaB | petB | Dshi_1141 | Dshi_3277 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.544 |
ctaC | ctaB | Dshi_1140 | Dshi_1141 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.999 |
ctaC | fixN | Dshi_1140 | Dshi_0661 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I PFAM: cytochrome c oxidase subunit I; NCBI conserved domains: cd01661, cbb3_Oxidase_I; high swissprot hit to Cytochrome c oxidase subunit 1 homolog, bacteroid from Sinorhizobium meliloti; high Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit I [Roseovarius sp. TM1035]; cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.928 |
ctaC | fixO | Dshi_1140 | Dshi_0662 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II PFAM: cytochrome C oxidase mono-heme subunit/FixO; NCBI conserved domains: fixO; no significant swissprot, high Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit II [Roseovarius sp. TM1035]; cbb3-type, subunit II. | 0.919 |
ctaC | fixP | Dshi_1140 | Dshi_0664 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.958 |
ctaC | fixQ | Dshi_1140 | Dshi_0663 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | PFAM: Cbb3-type cytochrome oxidase component; NCBI conserved domains: fixQ; no significant swissprot hit; low Ref ZP hit to cytochrome c oxidase, cbb3-type, subunit IV [Loktanella vestfoldensis SKA53]; cbb3-type, subunit IV. | 0.903 |
ctaC | petB | Dshi_1140 | Dshi_3277 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.997 |
fixG | Dshi_1660 | Dshi_0665 | Dshi_1660 | Nitrogen fixation protein fixG; TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; PFAM00037 4Fe-4S binding domain; high swissprot hit to Nitrogen fixation protein fixG from Sinorhizobium meliloti; high Ref ZP hit to iron-sulfur-binding protein, RdxA/RdxB/FixG family [Roseobacter sp. AzwK-3b]. | Transcriptional regulator; TIGRFAM: TIGR00738; PFAM: PF02082; SUPERFAMILY: SSF46785. | 0.926 |