Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Dshi_0135 | ate | Dshi_0135 | Dshi_1082 | PFAM: protein of unknown function DUF482 KEGG: sil:SPO3732 hypothetical protein, no swissprot. | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.641 |
| Dshi_0682 | ate | Dshi_0682 | Dshi_1082 | PFAM: protein of unknown function DUF465; no significant swissprot; low Ref ZP hit to Protein of unknown function DUF465 [Paracoccus denitrificans PD1222]. | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.439 |
| Dshi_0824 | ate | Dshi_0824 | Dshi_1082 | Histidine kinase; C-Terminal domain of arcB (aerobic respiration control), no PAS domain (sensor). | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.473 |
| Dshi_1083 | Dshi_1084 | Dshi_1083 | Dshi_1084 | Two transmembrane domains, RDD domain. | Conserved hypothetical protein. | 0.853 |
| Dshi_1083 | Dshi_1085 | Dshi_1083 | Dshi_1085 | Two transmembrane domains, RDD domain. | YbaK/prolyl-tRNA synthetase associated domain of unknown funktion. | 0.516 |
| Dshi_1083 | ate | Dshi_1083 | Dshi_1082 | Two transmembrane domains, RDD domain. | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.779 |
| Dshi_1084 | Dshi_1083 | Dshi_1084 | Dshi_1083 | Conserved hypothetical protein. | Two transmembrane domains, RDD domain. | 0.853 |
| Dshi_1084 | Dshi_1085 | Dshi_1084 | Dshi_1085 | Conserved hypothetical protein. | YbaK/prolyl-tRNA synthetase associated domain of unknown funktion. | 0.619 |
| Dshi_1084 | ate | Dshi_1084 | Dshi_1082 | Conserved hypothetical protein. | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.581 |
| Dshi_1085 | Dshi_1083 | Dshi_1085 | Dshi_1083 | YbaK/prolyl-tRNA synthetase associated domain of unknown funktion. | Two transmembrane domains, RDD domain. | 0.516 |
| Dshi_1085 | Dshi_1084 | Dshi_1085 | Dshi_1084 | YbaK/prolyl-tRNA synthetase associated domain of unknown funktion. | Conserved hypothetical protein. | 0.619 |
| Dshi_1085 | ate | Dshi_1085 | Dshi_1082 | YbaK/prolyl-tRNA synthetase associated domain of unknown funktion. | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.421 |
| aat | ate | Dshi_1394 | Dshi_1082 | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.582 |
| ate | Dshi_0135 | Dshi_1082 | Dshi_0135 | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | PFAM: protein of unknown function DUF482 KEGG: sil:SPO3732 hypothetical protein, no swissprot. | 0.641 |
| ate | Dshi_0682 | Dshi_1082 | Dshi_0682 | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | PFAM: protein of unknown function DUF465; no significant swissprot; low Ref ZP hit to Protein of unknown function DUF465 [Paracoccus denitrificans PD1222]. | 0.439 |
| ate | Dshi_0824 | Dshi_1082 | Dshi_0824 | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Histidine kinase; C-Terminal domain of arcB (aerobic respiration control), no PAS domain (sensor). | 0.473 |
| ate | Dshi_1083 | Dshi_1082 | Dshi_1083 | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Two transmembrane domains, RDD domain. | 0.779 |
| ate | Dshi_1084 | Dshi_1082 | Dshi_1084 | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Conserved hypothetical protein. | 0.581 |
| ate | Dshi_1085 | Dshi_1082 | Dshi_1085 | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | YbaK/prolyl-tRNA synthetase associated domain of unknown funktion. | 0.421 |
| ate | aat | Dshi_1082 | Dshi_1394 | Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.582 |