STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkGlucokinase; SWISSPROT P64254: Glucokinase; TIGRFAM: TIGR00749 glucokinase, proteobacterial type; COG: COG0837; PFAM: PF02685; SUPERFAMILY: SSF53067; Belongs to the bacterial glucokinase family. (323 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 0.969
bglA
SWISSPROT Q08638: Beta-glucosidase A; COG: COG2723 - Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; PANTHER: GLYCOSIDE HYDROLASES (PTHR10353); PFAM: PF00232; SPRINT: PR00131; PROSITE: PS00572.
 
    0.951
eda
SWISSPROT P0A955: KHG/KDPG aldolase; PFAM: PF01081; TIGRFAM: TIGR01182; COG: COG0800 - 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
 
 0.946
pgi
COG: COG0166 - Glucose-6-phosphate isomerase; PFAM: PF00342; SPRINT: PR00662; PROSITE: PS00174, PS00765; SUPERFAMILY: SSF53697; Belongs to the GPI family.
  
 
 0.943
pgm
SWISSPROT P39671: Phosphoglucomutase; COG: COG0033 - Phosphoglucomutase; PFAM: PF02880, PF02879, PF02878, PF00408.
  
 
 0.924
mro
Swiss-Prot: P05149-aldose 1-epimerase [Precursor] PFAM: Aldose 1-epimerase.
  
 
 0.913
tktA
Transketolase 1; SWISSPROT P27302: Transketolase 1; TIGRFAM: TIGR00232 transketolase, bacterial and yeast; COG: COG0021; PFAM: pfam00456, pfam02779, pfam02780; Belongs to the transketolase family.
    
 0.875
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.865
fbaA
Ketose-bisphosphate aldolase; Zinc-dependent, homodimeric enzyme.
   
 
 0.853
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.845
Your Current Organism:
Dinoroseobacter shibae
NCBI taxonomy Id: 398580
Other names: D. shibae DFL 12 = DSM 16493, Dinoroseobacter shibae DFL 12, Dinoroseobacter shibae DFL 12 = DSM 16493, Dinoroseobacter shibae DSM 16493, Dinoroseobacter shibae DSM 16493 = DFL 12, Jannaschia sp. DFL-12
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