node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dshi_0154 | Dshi_1932 | Dshi_0154 | Dshi_1932 | PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase KEGG: sit:TM1040_2447 NADPH-dependent FMN reductase; predicted flavoprotein COG0431. | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | 0.479 |
Dshi_0984 | Dshi_1932 | Dshi_0984 | Dshi_1932 | Ribonuclease G and E-like family. | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | 0.432 |
Dshi_0984 | rpoC | Dshi_0984 | Dshi_0269 | Ribonuclease G and E-like family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.537 |
Dshi_1930 | Dshi_1931 | Dshi_1930 | Dshi_1931 | Putative integral membrane protein DUF6; PFAM: PF00892; SUPERFAMILY: SSF103481. | Conserved hypothetical protein. | 0.595 |
Dshi_1930 | Dshi_1932 | Dshi_1930 | Dshi_1932 | Putative integral membrane protein DUF6; PFAM: PF00892; SUPERFAMILY: SSF103481. | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | 0.597 |
Dshi_1930 | ileS | Dshi_1930 | Dshi_1933 | Putative integral membrane protein DUF6; PFAM: PF00892; SUPERFAMILY: SSF103481. | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.478 |
Dshi_1931 | Dshi_1930 | Dshi_1931 | Dshi_1930 | Conserved hypothetical protein. | Putative integral membrane protein DUF6; PFAM: PF00892; SUPERFAMILY: SSF103481. | 0.595 |
Dshi_1931 | Dshi_1932 | Dshi_1931 | Dshi_1932 | Conserved hypothetical protein. | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | 0.776 |
Dshi_1931 | ileS | Dshi_1931 | Dshi_1933 | Conserved hypothetical protein. | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.626 |
Dshi_1932 | Dshi_0154 | Dshi_1932 | Dshi_0154 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase KEGG: sit:TM1040_2447 NADPH-dependent FMN reductase; predicted flavoprotein COG0431. | 0.479 |
Dshi_1932 | Dshi_0984 | Dshi_1932 | Dshi_0984 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | Ribonuclease G and E-like family. | 0.432 |
Dshi_1932 | Dshi_1930 | Dshi_1932 | Dshi_1930 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | Putative integral membrane protein DUF6; PFAM: PF00892; SUPERFAMILY: SSF103481. | 0.597 |
Dshi_1932 | Dshi_1931 | Dshi_1932 | Dshi_1931 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | Conserved hypothetical protein. | 0.776 |
Dshi_1932 | ileS | Dshi_1932 | Dshi_1933 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.793 |
Dshi_1932 | rpoA | Dshi_1932 | Dshi_0309 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.597 |
Dshi_1932 | rpoB | Dshi_1932 | Dshi_0268 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.430 |
Dshi_1932 | rpoC | Dshi_1932 | Dshi_0269 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.485 |
Dshi_1932 | smpB | Dshi_1932 | Dshi_0147 | COG: COG0625 - Glutathione S-transferase; PFAM: PF02798, PF00043; SUPERFAMILY: SSF47616, SSF52833; SWISSPROT Q46845: Uncharacterized GST-like protein yghU. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.437 |
ileS | Dshi_1930 | Dshi_1933 | Dshi_1930 | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | Putative integral membrane protein DUF6; PFAM: PF00892; SUPERFAMILY: SSF103481. | 0.478 |
ileS | Dshi_1931 | Dshi_1933 | Dshi_1931 | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | Conserved hypothetical protein. | 0.626 |