STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49965.1Putative regulatory protein RteC-like protein. (274 aa)    
Predicted Functional Partners:
EAQ50480.1
Hypothetical protein.
 
     0.772
EAQ50479.1
Hypothetical protein; COG0465 ATP-dependent Zn proteases.
  
     0.766
EAQ50481.1
Hypothetical protein; COG0210 Superfamily I DNA and RNA helicases.
 
     0.755
EAQ49940.1
Hypothetical protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
     0.694
EAQ50449.1
Putative partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
     0.673
EAQ49968.1
Phosphoribosylpyrophosphate synthetase.
 
     0.652
EAQ49966.1
Multidrug-efflux transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.641
EAQ49967.1
Copper-transporting ATPase, P-type (copB); COG2217 Cation transport ATPase.
       0.590
EAQ50005.1
Hypothetical protein.
 
     0.586
EAQ50003.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
 
     0.567
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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