STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50144.1Putative outer membrane protein, probably involved in nutrient binding. (496 aa)    
Predicted Functional Partners:
EAQ50143.1
ragA protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.928
EAQ48468.1
Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
   0.796
EAQ48490.1
Putative outer membrane protein, probably involved in nutrient binding; COG4206 Outer membrane cobalamin receptor protein.
  
 
   0.781
EAQ50498.1
COG1538 Outer membrane protein.
  
    0.762
EAQ50460.1
Hypothetical protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family.
  
     0.745
EAQ50145.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
   
   0.741
EAQ48867.1
Putative outer membrane protein, probably involved in nutrient binding; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
 
   0.732
EAQ50459.1
Hypothetical protein; COG0210 Superfamily I DNA and RNA helicases.
  
     0.728
EAQ48473.1
Putative outer membrane protein probably involved in nutrient binding; COG2217 Cation transport ATPase.
  
     0.667
EAQ49277.1
Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
   0.599
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.