STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48020.1TPR domain protein; COG0457 FOG: TPR repeat. (457 aa)    
Predicted Functional Partners:
EAQ48019.1
Putative outer membrane protein.
 
     0.790
EAQ47837.1
Hypothetical protein.
 
    0.785
EAQ49011.1
Hypothetical protein.
  
     0.775
EAQ51133.1
TonB.
  
     0.773
EAQ51168.1
Hypothetical protein.
  
     0.773
EAQ48024.1
COG0760 Parvulin-like peptidyl-prolyl isomerase.
 
 
   0.770
EAQ51169.1
Putative membrane protein; COG0848 Biopolymer transport protein.
  
     0.770
EAQ48021.1
Hypothetical protein.
 
     0.765
EAQ51167.1
Hypothetical protein; COG0833 Amino acid transporters.
  
     0.752
EAQ48920.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.