STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50635.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
EAQ50643.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.764
EAQ50636.1
4-amino-4-deoxychorismate lyase, putative; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
 
     0.761
EAQ49471.1
Hypothetical protein.
  
     0.745
EAQ47888.1
Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.
  
     0.744
EAQ48192.1
Hypothetical protein.
  
     0.718
EAQ49027.1
Hypothetical protein.
 
     0.709
EAQ48064.1
Hypothetical protein.
  
     0.702
EAQ49700.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.688
EAQ48334.1
Hypothetical protein.
  
     0.668
EAQ51468.1
Putative gliding motility protein.
  
     0.630
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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