STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Glov_0030PFAM: OmpA/MotB domain protein; KEGG: ppd:Ppro_3470 OmpA/MotB domain protein. (271 aa)    
Predicted Functional Partners:
Glov_0031
PFAM: MotA/TolQ/ExbB proton channel; KEGG: ppd:Ppro_3471 MotA/TolQ/ExbB proton channel.
 
 0.999
Glov_0566
MCP methyltransferase, CheR-type with PAS/PAC sensor; KEGG: ppd:Ppro_3165 signal transduction histidine kinase with CheB and CheR activity; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.965
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ppd:Ppro_3455 flagellar hook-associated protein FlgK.
 
  
 0.925
Glov_0032
PFAM: flagellar FlbD family protein; KEGG: ppd:Ppro_3472 flagellar FlbD family protein.
 
  
 0.911
Glov_3306
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ppd:Ppro_3424 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.910
Glov_3295
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gur:Gura_4204 protein of unknown function DUF1078 domain protein.
 
  
 0.905
Glov_3439
PFAM: OmpA/MotB domain protein; KEGG: gme:Gmet_0460 OmpA/MotB.
  
  
 
0.901
Glov_3303
PFAM: flagellar motor switch protein FliG; KEGG: ppd:Ppro_3427 flagellar motor switch protein FliG.
 
  
 0.894
Glov_2975
Diguanylate cyclase with PAS/PAC sensor; KEGG: mbu:Mbur_0399 MCP methyltransferase, CheR-type; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MCP methyltransferase CheR-type; GAF domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.874
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.871
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.