STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Glov_0105TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: eba:ebA2303 TrpR binding protein WrbA. (204 aa)    
Predicted Functional Partners:
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
Glov_0104
PFAM: Ferritin Dps family protein; KEGG: mhu:Mhun_0131 ferritin and Dps.
       0.693
Glov_1623
PFAM: Peptidoglycan-binding LysM; KEGG: ppd:Ppro_2328 peptidoglycan-binding LysM.
   
  
 0.596
Glov_0701
KEGG: ppd:Ppro_0500 hypothetical protein.
   
    0.532
Glov_1911
KEGG: gsu:GSU3386 lipoprotein, putative.
   
    0.532
Glov_0519
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ppd:Ppro_0013 chaperone DnaJ domain protein.
   
  
 0.507
Glov_3268
PFAM: Peptidoglycan-binding LysM; KEGG: ppd:Ppro_0530 peptidoglycan-binding LysM.
   
  
 0.484
Glov_0101
PFAM: Pirin domain protein; KEGG: gsu:GSU0825 pirin family protein; Belongs to the pirin family.
       0.455
Glov_0102
KEGG: gme:Gmet_2622 hypothetical protein.
       0.445
Glov_2804
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
  
 0.427
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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