STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1594910Protein yrdA, putative. (271 aa)    
Predicted Functional Partners:
RCOM_1505640
Protein yrdA, putative.
  
 
0.761
RCOM_1393780
NADH-u_ox-rdase domain-containing protein.
    
   0.729
RCOM_1281740
Uncharacterized protein.
    
   0.729
RCOM_0127730
Uncharacterized protein.
    
   0.714
RCOM_0458390
NADH-ubiquinone oxidoreductase, putative; Belongs to the complex I 75 kDa subunit family.
   
 
 0.706
RCOM_0798140
NADH-plastoquinone oxidoreductase, putative; Belongs to the complex I 20 kDa subunit family.
    
   0.704
RCOM_1675130
NADH-ubiquinone oxidoreductase 1, chain, putative.
    
   0.702
RCOM_1080980
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.689
RCOM_0991600
NADH-ubiquinone oxidoreductase 24 kD subunit, putative.
   
   0.654
RCOM_1581930
NADH dehydrogenase, putative.
   
 
 0.644
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.