STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1612270LOB domain-containing protein, putative. (203 aa)    
Predicted Functional Partners:
RCOM_1054850
Uncharacterized protein.
  
     0.513
RCOM_1267480
Serine-threonine protein kinase, plant-type, putative.
  
     0.507
RCOM_1039440
Uncharacterized protein.
  
     0.505
RCOM_0376180
DOG1 domain-containing protein.
  
     0.497
RCOM_0847310
Uncharacterized protein.
  
     0.494
RCOM_1454230
Uncharacterized protein.
  
     0.493
RCOM_0959330
PAP2_C domain-containing protein.
  
     0.493
RCOM_0963400
Uncharacterized protein.
  
     0.491
RCOM_1065110
Uncharacterized protein.
  
     0.490
RCOM_0963180
Uncharacterized protein.
  
     0.487
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.