STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1081160Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (912 aa)    
Predicted Functional Partners:
RCOM_1593180
Cytochrome P450, putative; Belongs to the cytochrome P450 family.
   
 
 0.983
RCOM_0893800
Phospholipase A21.
     
 0.923
RCOM_0705650
Allene oxide cyclase 3, chloroplast, putative.
   
  
 0.830
RCOM_0312720
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.804
RCOM_0015290
Allene oxide cyclase 4, chloroplast, putative.
   
  
 0.777
RCOM_0712140
12-oxophytodienoate reductase opr, putative.
   
  
 0.767
RCOM_0570940
Oxidoreductase, putative.
     
 0.721
RCOM_0851850
Oxidoreductase, putative.
     
 0.706
RCOM_0852500
Oxidoreductase, putative.
     
 0.706
RCOM_1020350
Glutathione reductase; Maintains high levels of reduced glutathione.
      
 0.691
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.