STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1241260Protein ABIL2, putative. (312 aa)    
Predicted Functional Partners:
RCOM_0912030
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.469
RCOM_0399190
Hydrolase, putative.
  
     0.454
RCOM_1280800
DNA binding protein, putative.
  
     0.452
RCOM_1014690
Ubiquitin-protein ligase, putative.
  
     0.450
RCOM_1309590
Zinc finger protein, putative.
  
     0.446
RCOM_0991590
DNA binding protein, putative.
  
     0.440
RCOM_0174830
Uncharacterized protein.
  
     0.436
RCOM_1393220
FAR1 domain-containing protein.
  
     0.433
RCOM_0107600
ZF-HD dimerization-type domain-containing protein.
  
     0.431
RCOM_1037910
Clathrin assembly protein, putative.
  
     0.430
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.