STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1244720Spike-1, putative; Belongs to the DOCK family. (1844 aa)    
Predicted Functional Partners:
RCOM_1598600
Rac gtpase, putative.
   
 0.792
RCOM_1511880
Rac gtpase, putative.
   
 0.792
RCOM_1052070
Rac gtpase, putative.
   
 0.792
RCOM_1012270
Rac gtpase, putative.
   
 0.792
RCOM_0554400
Rac gtpase, putative.
   
 0.792
RCOM_0658510
Rac gtpase, putative.
   
 0.792
RCOM_0490500
Rac gtpase, putative.
   
 0.792
RCOM_0363280
Rac gtpase, putative.
   
 0.792
RCOM_0708240
Guanine nucleotide-exchange, putative.
  
   
 0.697
RCOM_0990510
Uncharacterized protein.
  
  
 0.669
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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