STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0586980Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (341 aa)    
Predicted Functional Partners:
RCOM_1245600
NAD(P)-bd_dom domain-containing protein.
     
 0.540
RCOM_1435490
2-deoxyglucose-6-phosphate phosphatase, putative.
      
 0.521
RCOM_0700620
Apolipoprotein d, putative; Belongs to the calycin superfamily. Lipocalin family.
      
 0.511
RCOM_1817950
Outer membrane lipoprotein blc, putative.
      
 0.511
RCOM_0659660
Carrier, putative.
    
 0.491
RCOM_0839750
Sorting and assembly machinery (Sam50) protein, putative.
      
 0.485
RCOM_1594510
DNA binding protein, putative.
  
     0.430
RCOM_0733170
Sugar transporter, putative; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.412
RCOM_1122510
VDE domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.406
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.