STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0700730Lysosomal pro-X carboxypeptidase, putative. (501 aa)    
Predicted Functional Partners:
RCOM_0312450
Beta-galactosidase.
   
 
 0.663
RCOM_1691080
Crooked neck protein, putative.
      
 0.517
RCOM_0816780
Uncharacterized protein.
      
 0.517
RCOM_1341910
Cathepsin B, putative; Belongs to the peptidase C1 family.
  
   
 0.507
RCOM_1679670
Vacuolar-processing enzyme.
   
  
 0.465
RCOM_0798420
Vacuolar-processing enzyme, putative.
   
  
 0.465
RCOM_0599920
Cysteine protease, putative; Belongs to the peptidase C1 family.
  
  
 0.458
RCOM_1449120
Cysteine protease, putative; Belongs to the peptidase C1 family.
  
  
 0.419
RCOM_0253350
Cysteine protease, putative; Belongs to the peptidase C1 family.
  
  
 0.413
RCOM_1596200
Cysteine protease, putative; Belongs to the peptidase C1 family.
  
  
 0.408
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.