STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0621430C2H2-type domain-containing protein. (289 aa)    
Predicted Functional Partners:
RCOM_1052250
Uncharacterized protein.
  
     0.475
RCOM_0512630
Uncharacterized protein.
  
     0.471
RCOM_0492550
Transcriptional regulator SUPERMAN, putative.
  
     0.440
RCOM_0906720
Uncharacterized protein.
  
     0.435
RCOM_0466460
Nucleic acid binding protein, putative.
  
   
 0.433
RCOM_1343850
SANT domain-containing protein.
  
     0.426
RCOM_1037910
Clathrin assembly protein, putative.
  
     0.423
RCOM_1706450
DNA binding protein, putative.
  
     0.418
RCOM_1682330
Uncharacterized protein.
  
     0.415
RCOM_1512010
Calmodulin binding protein, putative.
  
     0.410
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
Server load: low (30%) [HD]